/ excess-deaths / README.md
README.md
1 # Excess Deaths During the Coronavirus Pandemic 2 3 The New York Times is releasing data that documents the number of deaths from all causes that have occurred during the coronavirus pandemic for 28 countries. We are compiling this time series data from national and municipal health departments, vital statistics offices and other official sources in order to better understand the true toll of the pandemic and provide a record for researchers and the public. 4 5 Official Covid-19 death tolls offer a limited view of the impact of the outbreak because they often exclude people who have not been tested and those who died at home. All-cause mortality is widely used by demographers and other researchers to understand the full impact of deadly events, including epidemics, wars and natural disasters. The totals in this data include deaths from Covid-19 as well as those from other causes, likely including people who could not be treated or did not seek treatment for other conditions. 6 7 We have used this data to produce [graphics tracking](https://www.nytimes.com/interactive/2020/04/21/world/coronavirus-missing-deaths.html) [the oubreak’s toll](https://www.nytimes.com/interactive/2020/06/10/world/coronavirus-history.html) and stories about [the United States](https://www.nytimes.com/interactive/2020/05/05/us/coronavirus-death-toll-us.html), [Ecuador](https://www.nytimes.com/2020/04/23/world/americas/ecuador-deaths-coronavirus.html), [Russia](https://www.nytimes.com/2020/05/11/world/europe/coronavirus-deaths-moscow.html), [Turkey](https://www.nytimes.com/2020/04/20/world/middleeast/coronavirus-turkey-deaths.html), [Sweden](https://www.nytimes.com/interactive/2020/05/15/world/europe/sweden-coronavirus-deaths.html) and [other countries](https://www.nytimes.com/2020/05/12/world/americas/latin-america-virus-death.html). We would like to thank a number of demographers and other researchers, listed at the end, who have provided data or helped interpret it. 8 9 ## Country and City-Level Data 10 11 The number of all-cause deaths recorded in each area, by week or month, can be found in the **[deaths.csv](deaths.csv)** file. ([Raw CSV](https://raw.githubusercontent.com/nytimes/covid-19-data/master/excess-deaths/deaths.csv)) For weekly data, the first and last weeks of the year, which are often partial weeks, were excluded. 12 13 ``` 14 country,placename,frequency,start_date,end_date,year,month,week,deaths,expected_deaths,excess_deaths,baseline 15 France,,weekly,2020-04-27,2020-05-03,2020,4,18,10498,10357,141,2010-2018 weekly average 16 ``` 17 18 Some of the data is only available at the city level. 19 20 ``` 21 country,placename,frequency,start_date,end_date,year,month,week,deaths,expected_deaths,excess_deaths,baseline 22 Turkey,Istanbul,weekly,2020-04-06,2020-04-12,2020,4,15,2193,1429,764,2018-2019 weekly average 23 ``` 24 25 26 The deaths fields have the following definitions: 27 28 **deaths**: The total number of confirmed deaths recorded from any cause. 29 **expected_deaths**: The baseline number of expected deaths, calculated from a historical average. See [expected deaths](#expected-deaths). 30 **excess_deaths**: The number of deaths minus the expected deaths. 31 32 The time fields have the following definitions: 33 34 **frequency**: Weekly or monthly, depending on how the data is recorded. 35 **start_date**: The first date included in the period. 36 **end_date**: The last date included in the period. 37 **month**: Numerical month. 38 **week**: Epidemiological week, which is a standardized way of counting weeks to allow for year-over-year comparisons. Most countries start epi weeks on Mondays, but others vary. 39 **baseline**: The years used to calculate expected_deaths. 40 41 ## Methodology 42 43 The data is the product of journalists in a number of countries who monitor official data releases and ask government officials for information. We have consulted with demographers, medical officials and local sources to confirm that this data is broadly representative of how many people have died. In some countries, the number of burials, hospital deaths or other factors are used to confirm that the underlying trends are representative. 44 45 But mortality data in the middle of a pandemic is not perfect. Many countries have not yet published any data on all-cause mortality. And during a pandemic, normal patterns of death registration may be disrupted, which could lead to changes in how many deaths are captured. 46 47 Most of the countries in this dataset have widespread vital statistics coverage. But many low-income countries have [unreliable death registration systems](https://twitter.com/helleringer143/status/1261868447903948800), making it very difficult to assess their levels of excess mortality. A rough guide to the historical completeness of death registration systems by country is available from the United Nations: 48 https://unstats.un.org/unsd/demographic-social/crvs/documents/Website_final_coverage.xls 49 50 Some countries are publishing mortality data faster than normal in order to understand how mortality is changing. That means data, especially for recent time periods, may be revised. It is usually revised upwards as more deaths are reported. 51 52 Expected deaths for [the United States](https://www.nytimes.com/interactive/2020/05/05/us/coronavirus-death-toll-us.html) were calculated with a simple model based on the number of all-cause deaths from 2015 to 2019 released by the Centers for Disease Control and Prevention, adjusted to account for trends, like population changes, over time. 53 54 Our analysis aims to show mortality statistics for as much of the country as possible, but it is limited to those states where mortality data is sufficiently complete. 55 56 Some states are so far behind in submitting death certificates to the C.D.C. that the C.D.C. does not recommend relying on their recent death reporting. In Pennsylvania and Ohio, for example, death reporting seems to be lagging far behind the normal rate all year, according to the C.D.C., even though their reporting is usually more timely, so we have excluded data from those states, in addition to Alaska, Connecticut, Louisiana, North Carolina, Puerto Rico, Rhode Island and West Virginia. 57 58 See [Data Sources](#data-sources) below for the source of data for each country and city in this dataset. 59 60 ## Expected Deaths 61 62 We have calculated an average number of expected deaths for each area based on historical data for the same time of year. These expected deaths are the basis for our [excess death calculations](https://www.nytimes.com/interactive/2020/04/21/world/coronavirus-missing-deaths.html), which estimate how many more people have died this year than in an average year. 63 64 To estimate expected deaths, we fit a linear model to the reported deaths in each country from earlier years to January 2020. The model has two components — a linear time trend to account for demographic changes and a smoothing spline to account for seasonal variation. For countries limited to monthly data, the model includes month as a fixed effect rather than using a smoothing spline. 65 66 The number of expected deaths are not adjusted for how non-Covid-19 deaths may change during the outbreak, which will take some time to figure out. As countries impose control measures, deaths from causes like road accidents and homicides may decline. And people who die from Covid-19 cannot die later from [other causes](https://twitter.com/AndrewNoymer/status/1241620305350549504), which may reduce other causes of death. Both of these factors, if they play a role, would lead these baselines to understate, rather than overstate, the number of excess deaths. 67 68 The number of years used in the expected deaths calculation changes depending on what data is available. See Data Sources for the years used to calculate the baselines. 69 70 71 ## Data Sources 72 73 **Austria** 74 75 Source: [Statistics Austria](http://www.statistik.at/web_de/statistiken/menschen_und_gesellschaft/bevoelkerung/gestorbene/index.html) 76 Baseline years: 2015-2019 77 Data frequency: weekly 78 79 **Belgium** 80 81 Source: Sciensano publishes a [weekly report](https://covid-19.sciensano.be/fr/covid-19-situation-epidemiologique). More historical mortality data is from the [Belgian Mortality Monitoring](https://epistat.wiv-isp.be/momo/) dashboard. 82 Baseline years: 2016-2019 83 Data frequency: weekly 84 85 **Brazil** 86 87 Source: Data for six cities in Brazil — São Paulo, Rio de Janeiro, Fortaleza, Manaus, Recife and Belem — is from the [Registro Civil](https://registrocivil.org.br/) and the Ministry of Health. 88 Baseline years: 2016-2019 89 Data frequency: monthly 90 91 **Denmark** 92 93 Source: [Statistics Denmark](https://www.statbank.dk/dodc2) 94 Baseline years: 2015-2019 95 Data frequency: weekly 96 97 **Ecuador** 98 99 Source: [General Direction of Civil Registry](https://www.registrocivil.gob.ec/cifras/) 100 Baseline years: 2017-2019. 2019 data is only available for Jan.-April. 101 Data frequency: monthly 102 103 **Finland** 104 105 Source: [Statistics Finland](https://pxnet2.stat.fi/PXWeb/pxweb/en/Kokeelliset_tilastot/Kokeelliset_tilastot__vamuu_koke/statfin_vamuu_pxt_12ng.px/) 106 Baseline years: 2015-2019 107 Data frequency: weekly 108 109 **France** 110 111 Source: INSEE (2018-2020 data can be found [here](https://www.insee.fr/fr/statistiques/4487988?sommaire=4487854)) 112 Baseline years: 2010-2019 113 Data frequency: weekly 114 115 **Germany** 116 117 Source: [Federal Statistics Office](https://www.destatis.de/EN/Themes/Society-Environment/Population/Deaths-Life-Expectancy/_node.html;jsessionid=91286BFEECCABAD3052B72D2C2760F99.internet8732) 118 Baseline years: 2016-2019 119 Data frequency: weekly 120 121 **Jakarta, Indonesia** 122 123 Source: [Jakarta’s Department of Parks and Cemeteries](https://pertamananpemakaman.jakarta.go.id/v140/t15) 124 Baseline years: 2010-2019 125 Data frequency: monthly burials 126 127 **Israel** 128 129 Source: [Population and Immigration Authority](https://www.gov.il/BlobFolder/news/death_stats_2001_2020/he/death_stats_2001_2020.pdf) 130 Baseline years: 2015-2019 131 Data frequency: monthly 132 133 **Italy** 134 135 Source: [The Italian National Institute of Statistics](https://www.istat.it/en/archivio/240106) 136 Baseline years: 2015-2019 monthly average. Historical data is only available as a four-year average from January 1 through March 31. 137 Data frequency: monthly 138 139 **Netherlands** 140 141 Source: [Statistics Netherlands](https://opendata.cbs.nl/#/CBS/en/dataset/70895ENG/table?ts=1588591754264) 142 Baseline years: 2016-2019 143 Data frequency: weekly 144 145 **Norway** 146 147 Source: [Statistics Norway](https://www.ssb.no/statbank/table/07995/) 148 Baseline years: 2015-2019 149 Data frequency: weekly 150 151 **Mexico City, Mexico** 152 153 Source: [Death certificate records in 2019 and 2020 via General Directorate of the Civil Registry](http://www.rcivil.cdmx.gob.mx/solicitudactas/busqueda/registrales?clase_acta=DEFUNCION)[, collected by Mario Romero and Laurianne Despeghel](https://github.com/mariorz/folio-deceso); 2016-2018 mortality from National Institute of Statistics, Geography and Informatics (INEGI) 154 Baseline years: 2016-2019 155 Data frequency: weekly 156 157 **Peru** 158 159 Source: [Mortality Information System](https://www.minsa.gob.pe/defunciones/) (Sinadef) for 2017-2020; Health Ministry for 2016. 160 Baseline years: 2017-2019 161 Data frequency: monthly 162 163 **Portugal** 164 165 Source: Eurostat 166 Baseline years: 2015-2019 167 Data frequency: weekly 168 169 **Moscow, Russia** 170 171 Source: [Moscow City Government](https://data.mos.ru/opendata/7704111479-dinamika-registratsii-aktov-grajdanskogo-sostoyaniya?pageNumber=13&versionNumber=3&releaseNumber=42&fbclid=IwAR23dK1YBLeGipw4UPg4hi_w6cDOE94fuZ0Z7lwx28u-rAZCEoqAAaIQpF8) 172 Baseline years: 2015-2019 173 Data frequency: monthly 174 175 **South Korea** 176 177 Source: [Statistics Korea](http://kosis.kr/statisticsList/statisticsListIndex.do?menuId=M_01_01&vwcd=MT_ZTITLE&parmTabId=M_01_01#SelectStatsBoxDiv) 178 Baseline years: 2015-2019 179 Data frequency: monthly 180 181 **Sweden** 182 183 Source: [Statistics Sweden](https://www.scb.se/en/About-us/news-and-press-releases/statistics-sweden-to-publish-preliminary-statistics-on-deaths-in-sweden/) 184 Baseline years: 2015-2019 185 Data frequency: weekly 186 187 **Switzerland** 188 189 Source: [Federal Statistics Bureau](https://www.bfs.admin.ch/bfs/fr/home/statistiques/sante/etat-sante/mortalite-causes-deces.html) 190 Baseline years: 2016-2019 191 Data frequency: weekly 192 193 194 **Thailand** 195 196 Sources: [Bureau of Registration Administration](https://www.cdg.co.th/website/en/industries/government/civil-registration-and-the-national-identification-card-system-the-bureau-of-registration-administration-the-department-of-provincial-administration-2/) [Department of Provincial Administration](https://www.dopa.go.th/main/web_index) 197 Baseline years: 2015-2019 198 Data frequency: monthly 199 200 **United Kingdom** 201 202 Sources: [Office for National Statistics](https://www.ons.gov.uk/peoplepopulationandcommunity/birthsdeathsandmarriages/deaths/datasets/weeklyprovisionalfiguresondeathsregisteredinenglandandwales); [National Records of Scotland](https://www.nrscotland.gov.uk/covid19stats); [Northern Ireland Statistics and Research Agency](https://www.nisra.gov.uk/publications/weekly-deaths). 203 Baseline years: 2010-2019 204 Data frequency: weekly 205 206 207 **United States** 208 209 Source: [Centers for Disease Control and Prevention](https://www.cdc.gov/nchs/nvss/vsrr/covid_weekly/) 210 Baseline years: 2015-2019 211 Data frequency: weekly 212 213 214 **Boston, United States** 215 216 Source: [Massachusetts Department of Public Health](https://www.mass.gov/lists/death-data) 217 Baseline years: 2015-2019 218 Data frequency: weekly 219 220 221 **Chicago, United States** 222 223 Source: [Illinois Department of Public Health](https://www.dph.illinois.gov/data-statistics/vital-statistics/death-statistics) 224 Baseline years: 2017-2019 225 Data frequency: weekly 226 227 228 **Denver, United States** 229 230 Source: [Colorado Department of Public Health and Environment](https://www.colorado.gov/pacific/cdphe/vital-statistics-program) 231 Baseline years: 2017-2019 232 Data frequency: monthly 233 234 235 **Detroit, United States** 236 237 Source: [Michigan Department of Health and Human Services](https://www.michigan.gov/mdhhs/0,5885,7-339-73970_2944_4669_4686---,00.html) 238 Baseline years: 2017-2019 239 Data frequency: weekly 240 241 242 **Miami, United States** 243 244 Source: [Florida Department of Health](http://www.floridahealth.gov/statistics-and-data/index.html) 245 Baseline years: 2015-2019 246 Data frequency: monthly 247 248 249 **New York City, United States** 250 251 Source: [Centers for Disease Control and Prevention](https://gis.cdc.gov/grasp/fluview/mortality.html) 252 Baseline years: 2015-2019 253 Data frequency: weekly 254 255 256 257 258 ## Other Collections of All-Cause Mortality Data 259 260 [The Human Mortality Database](https://www.mortality.org/) includes recent all-cause deaths collected by demographers at the Max Planck Institute for Demographic Research and other institutions. [The Economist](https://github.com/TheEconomist/covid-19-excess-deaths-tracker) and the [Financial Times](https://github.com/Financial-Times/coronavirus-excess-mortality-data) are also publicly releasing their data on all-cause mortality. 261 262 ## License and Attribution 263 264 This data is licensed under the same terms as our Coronavirus Data in the United States data. In general, we are making this data publicly available for broad, noncommercial public use including by medical and public health researchers, policymakers, analysts and local news media. 265 266 If you use this data, you must attribute it to “The New York Times” in any publication. If you would like a more expanded description of the data, you could say “Data from The New York Times, based on reports from national and municipal health agencies.” 267 268 If you use it in an online presentation, we would appreciate it if you would link to our graphic tracking these deaths [https://www.nytimes.com/interactive/2020/04/21/world/coronavirus-missing-deaths.html](https://www.nytimes.com/interactive/2020/04/21/world/coronavirus-missing-deaths.html). 269 270 If you use this data, please let us know at covid-data@nytimes.com. 271 272 See our [LICENSE](LICENSE) for the full terms of use for this data. 273 274 ## Contact Us 275 276 If you have questions about the data or licensing conditions, please contact us at: 277 278 covid-data@nytimes.com 279 280 281 ## Contributors 282 283 Allison McCann, Jin Wu, Josh Katz and Denise Lu have been leading our data collection efforts. 284 285 Elian Peltier contributed reporting from Paris, Muktita Suhartono from Bangkok, Carlotta Gall from Istanbul, Anatoly Kurmanaev from Caracas, Venezuela, Monika Pronczuk from Brussels, José María León Cabrera from Quito, Ecuador, Irit Pazner from Jerusalem, Mirelis Morales from Lima and Manuela Andreoni from Rio de Janeiro. 286 287 Thank you to Stéphane Helleringer, Johns Hopkins University; Tim Riffe, Max Planck Institute for Demographic Research; Lasse Skafte Vestergaard, EuroMOMO; Vladimir Shkolnikov, Max Planck Institute for Demographic Research; Jenny Garcia, Institut National d'Études Démographiques; Tom Moultrie, University of Cape Town; Isaac Sasson, Tel Aviv University; Patrick Gerland, United Nations; S V Subramanian, Harvard University; Paulo Lotufo, University of São Paulo; and Marcelo Oliveira.