.. ai-chorus-architecture.md ai-council-protocol.md ambient-alignment-interface.md artifact-id-system.md automatic-mode-detection.md autonomous-exploration-tribes.md axiom-conformance-test.md build-test-ground-protocol-test-record.md build-test-ground-protocol.md continuous-crystallization.md error-detection-layers.md execution-autonomy-gradient.md first-officer-hud.md first-officer-protocol.md flight-protocol.md fractal-tribe-architecture.md free-energy-alignment.md gap-analysis-hierarchy.md graph-aware-writing.md graph-conversation-interface.md handoff-protocol.md human-input-layer.md infrastructure-over-suggestion.md integration-over-separation.md live-compression-protocol.md mandatory-phoenix-extraction.md mission-control-protocol.md mnemonic-id-protocol.md model-allocation-strategy.md peer-review-protocol.md phoenix-state-protocol.md pre-scale-safety-audit.md principle-steward-protocol.md resonance-driven-linking.md shape-propagation-protocol.md spatial-thread-interface.md sprint-assessment-protocol.md style-guide.md test-before-ship.md thread-forking-protocol.md thread-tracking-protocol.md threshold-triggered-automation.md transparent-automation-principle.md tribal-build-protocol.md tribe-sizing-algorithm.md trust-as-free-energy.md typed-resonance-principle.md validation-loop.md